PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008383-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 88aa    MW: 10183.6 Da    PI: 8.0679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008383-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.5e-0714561254
                    HHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 12 RRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    R d+i + +++L+ llP+ ++  + +++s  e+Le+++ YI++L
  AUR62008383-RA 14 REDEISELIFKLQALLPErRC-RHLRRVSRDEVLEEVCSYIRKL 56
                    5689**************654.45555***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MSSSRKSLSS RCPREDEISE LIFKLQALLP ERRCRHLRRV SRDEVLEEVC SYIRKLHKQV  60
DDTSERISQL LASTDLDADV LRSLLQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-20bHLH family protein