PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008420-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 422aa    MW: 48333.1 Da    PI: 4.4953
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008420-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK60.72.7e-192703031952
          RWP-RK  19 kdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  AUR62008420-RA 270 NEAAKELNVGLTLLKKRCRELGIQRWPHRKLMSL 303
                     68*****************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MASDAITEPA TTTATTEDME LENPQPGQKD DAKREREEAD DAEVTAKKQK VEEEKSVEES  60
RMEKLEEEGD GKPEPEGPVV LGPKTFGSSV EMFDYFYKLL HHWPTNIYFN KYEQLVLQEL  120
INKGHPEPEK KIGSGINAFE IRQHPEWKSR CFFVIRADES VEDFSFRNGY NIPCDWQYEL  180
PLDVSMMDAT PLIECFPNDP TYPFFTSLDI VSNFTIPHVI EDNSTMYNDC GHGFEGLQDL  240
ELESVPPPLA LCNDESDYRK DNLHENKINN EAAKELNVGL TLLKKRCREL GIQRWPHRKL  300
MSLQTLIRNV QEMGKEGGDK NEAKLREAIQ ILEQEKKLME KMPDLQLETR TKRLRQACFK  360
ANYKKRKMIN NLNYDVSSQS CSSCASNSTD YANFGTSKGD DQYGDDVVDA MDDVNFSYFC  420
S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.17e-42Nin-like family protein