PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008733-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 380aa MW: 43990.8 Da PI: 6.791

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008733-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.2	6.7e-27	206	259	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ Wt+eLH++Fvea++q+ Gs k +Pk+ile+m+++gLt+e+v+SHLQkYRl AUR62008733-RA 206 KQRVIWTTELHAKFVEAINQI-GSAKVVPKKILEIMNIPGLTRENVASHLQKYRL 259 79*****************.99****************************8 PP
2	Myb_DNA-binding	39.9	1e-12	210	258	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WTte++ ++v+a++q G+ +k+I + m+ g+t++++ s++qky+ AUR62008733-RA 210 IWTTELHAKFVEAINQIGSAkvVPKKILEIMNiPGLTRENVASHLQKYR 258 5***************99**************************7 PP
3	Response_reg	64.3	6e-22	7	114	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedalealka 92 vlivd + + + l+++l++ ++ +v+ ++ ++ea+ +l+e + +D +++D++mp+mdG+ellk i +++p+++ + + ++e+++ + l AUR62008733-RA 7 VLIVDYDLNHLLRLEKMLQSNHF-KVTKCQYAKEAISMLQEDRnrFDFVITDLNMPDMDGFELLKCIGLD-MDIPVLMTStTDDDEDLIRKGLIH 99 89*999***********.***********999999******************764.48***45555999999 PP TESEEEESS--HHHH CS Response_reg 93 GakdflsKpfdpeel 107 Ga dfl Kp+++e++ AUR62008733-RA 100 GACDFLIKPIQMENV 114 ********99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MNREWKVLIV DYDLNHLLRL EKMLQSNHFK VTKCQYAKEA ISMLQEDRNR FDFVITDLNM 60 PDMDGFELLK CIGLDMDIPV LMTSTTDDDE DLIRKGLIHG ACDFLIKPIQ MENVKHLWKY 120 AYWKQRHQRV EQPTRSTSSS SHIDNDLNES NTRENHFEKI NINSSKIDSI VASSDCEDDE 180 KCMKKRKHAT NLGDLLVNDD ATTKKKQRVI WTTELHAKFV EAINQIGSAK VVPKKILEIM 240 NIPGLTRENV ASHLQKYRLY HKKFEQISQH QNEGKTFISP IDVYSVQAQV LPNSSPFQVR 300 DFTSLNSHPR NLRLHHHVEN GGNVIYHPVV SYAYCSTKVP LVENACSLKE TTSIEEQVNN 360 TYESYVHDLC YNNTTFNFD*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MNREWKVLIV DYDLNHLLRL EKMLQSNHFK VTKCQYAKEA ISMLQEDRNR FDFVITDLNM  60
PDMDGFELLK CIGLDMDIPV LMTSTTDDDE DLIRKGLIHG ACDFLIKPIQ MENVKHLWKY  120
AYWKQRHQRV EQPTRSTSSS SHIDNDLNES NTRENHFEKI NINSSKIDSI VASSDCEDDE  180
KCMKKRKHAT NLGDLLVNDD ATTKKKQRVI WTTELHAKFV EAINQIGSAK VVPKKILEIM  240
NIPGLTRENV ASHLQKYRLY HKKFEQISQH QNEGKTFISP IDVYSVQAQV LPNSSPFQVR  300
DFTSLNSHPR NLRLHHHVEN GGNVIYHPVV SYAYCSTKVP LVENACSLKE TTSIEEQVNN  360
TYESYVHDLC YNNTTFNFD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-70	ARR-B family protein