PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008744-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 111aa    MW: 11980 Da    PI: 9.3408
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008744-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-182761135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ C+tt+TplWR gp g+ktLCnaCG++y k+++
  AUR62008744-RA 27 CTDCQTTTTPLWRGGPAGPKTLCNACGIKYHKRRR 61
                    *******************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MMLDLKEEQP CSVSESQSSS SELLKRCTDC QTTTTPLWRG GPAGPKTLCN ACGIKYHKRR  60
RALLGLDKGK IKVMASGGIR QSAEKLRDKL GEVEQAAMLL MALSYGSVYA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.12e-30GATA family protein