PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62008866-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 162aa MW: 18582.8 Da PI: 9.8379

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62008866-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	5e-08	30	58	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 3 rahnerErrRRdriNsafeeLrellPk.a 30 ++h +Er+RR+++N+ + Lr+l P AUR62008866-RA 30 MSHITVERNRRRQMNDHLKVLRSLTPCfY 58 6899**********************844 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MKNPCMAAEH INPRKHHLRR CHRTPKTHTM SHITVERNRR RQMNDHLKVL RSLTPCFYIK 60 KELVASCNSP IADVEAKISG SNVVLRVISK RTHGQLLKII STLEKLSFKI LHLNISSMDD 120 TVLYYFVVKI GLECQLSMEE LAAEVQRCFC TNDTINKITE I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06120.1	4e-44	bHLH family protein