PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008966-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 256aa    MW: 29016.5 Da    PI: 5.0367
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008966-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.1e-10855447
                     S-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                     WT e d+ +  a +++  +     W++Ia++++ ++t +++k ++q++
   AUR62008966-RA  8 WTWEQDKAFETALAMHFEDnseaKWAKIASRIPGNKTIEDVKQHYQML 55
                     *****************99***************************87 PP
2Myb_DNA-binding41.72.7e-1398143247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++W++ E+ +++ +  ++G+g+Wk+I++++ k+R++ q+ s+ qky
   AUR62008966-RA  98 QPWSEAEHRQFLLGLDRFGKGDWKSISKEFVKTRSATQVASHAQKY 143
                      79*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MANSSSLWTW EQDKAFETAL AMHFEDNSEA KWAKIASRIP GNKTIEDVKQ HYQMLFEDIM  60
AIESGMVPLP SYTPNGRGNI FDVPVTEEEY VWESRKGQPW SEAEHRQFLL GLDRFGKGDW  120
KSISKEFVKT RSATQVASHA QKYFKRQANK LKKDTKRWSI FDITVPTKAQ PGIQNHGSSS  180
SGSSNYEYAP KGNEMNSAIN EAMIQQGFVE VQPMHQQVPV AVPQEYMSPP ESWCLEDDMV  240
ADYNVDECLS QLPPL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-48MYB family protein