PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009097-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 261aa    MW: 29907.5 Da    PI: 5.8594
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009097-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.11.5e-17163213252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      k+++l+d + yF+ +i+dA+ eL +c+Tv+K++ R + I+RWP+Rk+ksl
  AUR62009097-RA 163 VKNMTLQDFAIYFDRTINDASVELRLCATVIKKKLRSFEIDRWPYRKVKSL 213
                     589**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDPYKHEPNP TDGPEHSNPP VAPIDDDGDA FWSMIDSWVN DPVPLQEMPF VQSDDHHQSV  60
GFDGGDLSTY TTRLDIHGNV GSIYHAFYFN DGVPLSGDHM GNNQFLDFST RSFEDIREYL  120
KGYIGNHRQN GYILLQEPIS LFYEALSVGF DWINFGGKQR ERVKNMTLQD FAIYFDRTIN  180
DASVELRLCA TVIKKKLRSF EIDRWPYRKV KSLQGKLTNL IGRTGGEYNR LIKMGPERVE  240
TEIQKLQQRI SDILSGRRKP *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.18e-11Nin-like family protein