PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009131-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 210aa    MW: 24657.7 Da    PI: 8.4364
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009131-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-12105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       W+++E+ l+v +   +Ggg+W++I+r++ k+R++ q+ s+ qk+
   AUR62009131-RA 105 QWSKDEHRLFVIGAMIYGGGDWRSISRMVVKTRSPIQVASHAQKF 149
                      6******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MELPSSSSKY KAWSFEENKL FENCIAMEYV SSDEFDWWTP IANVFFRGTR TPDEIKNHYN  60
QLVFDVNEIE NGRFCIPKYK DDKVDNYNNG HDNFIYKKKK IRYTQWSKDE HRLFVIGAMI  120
YGGGDWRSIS RMVVKTRSPI QVASHAQKFY DRKKHPKNTK RASIHDITTV DHDTTLDLCQ  180
RNLIDLQTFQ SYIAKLAEQD QATGEQGRH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-26MYB family protein