PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009149-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 253aa    MW: 26633.1 Da    PI: 8.4756
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009149-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA36.56.7e-12187209123
            GATA   1 CsnCgttkTplWRrgpdgnktLC 23 
                     Cs C+tt+TplWR+gp+g+k+LC
  AUR62009149-RA 187 CSDCHTTTTPLWRSGPQGPKKLC 209
                     *********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
LVAGVVVVAG VVNVADVVAV IVVVPVVKVV VVVVIVVDAL VGVVDVALVG VVAVAVVVVV  60
VVVAAVVVAA PVVVAVVVAA PVVVAAVGKL VLSHENKAND LGQPCSPWLQ NTIGDDSGCS  120
YGYSFKAKIE TPVNYNNDQN KYSRSKWKPS KVRIMQKIAT SKDSRDSKKQ LDHDLSKRQN  180
NDGIRVCSDC HTTTTPLWRS GPQGPKKLCF EDFALSSNMD YLKANSKRSF PRDEEEGAIL  240
LMALSCGLAC SL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-14GATA family protein