PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009265-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 236aa    MW: 25177.2 Da    PI: 6.8899
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009265-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA43.64.1e-14167195129
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGly 29 
                     C +C t kTp+WR gp g+ktLCnaCG++
  AUR62009265-RA 167 CLHCATDKTPQWRTGPMGPKTLCNACGVR 195
                     99*************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
CNSSFSGNND SIFPPAGDIG SHFSGELGVP YDDLAELEWL SNFVEESFSS EDLHKFHLIP  60
AMSAMKTRTD DVSETRYYPT EPTRAAPLPT SPIFSPEMAV PGKARSKRSR AAPCNWASRL  120
LVLAPGGNEQ VPITKPTKSA GSKKKGSSLG GIGPMVDPTS GGEVRKCLHC ATDKTPQWRT  180
GPMGPKTLCN ACGVRECLVT GYSDSDYAAD VDTRRSVTGY VFTLGGSVDP RQQLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-47GATA family protein