PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009286-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 218aa    MW: 24061.3 Da    PI: 5.1087
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009286-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.4e-1850101156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++ge
  AUR62009286-RA  50 PVYRGVRMRT-WGKWVSEIREPKK---KSRIWLGTFPNPEMAARAHDVAALSIKGE 101
                     68*****998.**********854...6************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MMEIQIPINS NINNNRSGSS IRDDTTTTSI PNLDPVKTPK RARDSGGKHP VYRGVRMRTW  60
GKWVSEIREP KKKSRIWLGT FPNPEMAARA HDVAALSIKG ESAILNFPEL AGLLPRPVSQ  120
SPRDVQAAAA KAAAMENIHS MEIGNSDELS EIVELPSLGP VGNSGEMMGR ELVYDFDSGD  180
NNGWIYHNPP WMMQCMEDFV VVPENVISTT FEGLLWD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-56ERF family protein