PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009378-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 142aa    MW: 16081.4 Da    PI: 9.6055
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009378-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.6e-056688123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C +C+k F  k + ++H +++
  AUR62009378-RA 66 FTCRKCSKAFAVKGDWRTHEKNC 88
                    89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MWGHGSQYRR GPESLKGAQP TPMLRLPCYC CAPGCKHNIE HPRSRPLKDF RTLQTHYKRK  60
HGVKPFTCRK CSKAFAVKGD WRTHEKNCGR VWYCVCGSDF KHKRSLKDHI KAFGHGHFAF  120
GVNGLDECLD EPHASDADSS L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.15e-82C2H2 family protein