PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009548-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 690aa    MW: 78590.9 Da    PI: 5.1789
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009548-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.51.7e-1153166871374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cAeavs  +l+ a++lL++++++a+p gd++qR+a+yf+++L+ar+++++selyka   ++ s   s + l  ++l++ + P+ + +h
  AUR62009548-RA 316 LRTLLIQCAEAVSCAELRTANELLKQIRQHATPFGDSVQRIAHYFANGLEARMTGTGSELYKASDWKRFS---SYDILRGYRLYVSALPFQRTTH 407
                     6789**********************************************************99999998...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                      +aNq+I + +e++ ++HiiDf+i +G+QWp+L+q+L+ Rp gpp+l+iTgv++p+sg   ++++eetg+rLa ++e++gvpfef++ +a+r+++
  AUR62009548-RA 408 YVANQTIAKLAEKAPKIHIIDFGIFMGFQWPCLIQTLSRRPLGPPRLKITGVDNPKSGfkPAQTVEETGRRLAGYCERFGVPFEFQA-IAQRWHT 501
                     *********************************************************999***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+++++++E ++V++ ++  rl+de+v+  s+rd++Lklv+sl+P++++    +   n++ F +rf eal++ys+lfd +ea++ re+++r+
  AUR62009548-RA 502 IKPEDFNIEKDELVVVSCLYKSRRLPDETVDAGSPRDTFLKLVRSLNPDLFINGVVNGTFNAPFFITRFREALYHYSSLFDVFEATMLREDQQRQ 596
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +E+ l g++++n+vaceg+er+er et+++W+ r ++aGF ++pl++ ++++a++++r  +++ ++ve+++++lv+gWk+r L+++S+W+
  AUR62009548-RA 597 LIENYLYGKDAMNIVACEGSERIERPETYKQWQVRHKRAGFMQIPLDQGIVNKARAMVRANYQKDFMVEQDRHWLVQGWKGRILFAISCWK 687
                     **************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MYFVPEEEYP SFSSSERCVN ENGCFQNYGL YEEPISVNDP LYDQYYQTHE ENSEIPDFSD  60
ACLKYMNDIL MEEDMDDNPA TLQDYHALQA TEKSFYDVLA GETYPLCPDQ RPLSDDLNTN  120
SSNQGSSGCY GVGVESNWLI HQSLSEGFQH IDDTHHVLES TSEGSGSSSS FNYLKDGVAD  180
SPVSTLFVNE LSSVVNSGIS RACKEKNYEG IGDSREELGY GSRGRKNLHR ENSGQVEERS  240
AKQLATNNEE YSEMEKFDDA LMISKEENND ILTCISNNAV KDASQDSEQE EEPKGSKSKR  300
RAKRGKKKTS TEVVDLRTLL IQCAEAVSCA ELRTANELLK QIRQHATPFG DSVQRIAHYF  360
ANGLEARMTG TGSELYKASD WKRFSSYDIL RGYRLYVSAL PFQRTTHYVA NQTIAKLAEK  420
APKIHIIDFG IFMGFQWPCL IQTLSRRPLG PPRLKITGVD NPKSGFKPAQ TVEETGRRLA  480
GYCERFGVPF EFQAIAQRWH TIKPEDFNIE KDELVVVSCL YKSRRLPDET VDAGSPRDTF  540
LKLVRSLNPD LFINGVVNGT FNAPFFITRF REALYHYSSL FDVFEATMLR EDQQRQLIEN  600
YLYGKDAMNI VACEGSERIE RPETYKQWQV RHKRAGFMQI PLDQGIVNKA RAMVRANYQK  660
DFMVEQDRHW LVQGWKGRIL FAISCWKPT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-165GRAS family protein