PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009554-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 399aa    MW: 44689.5 Da    PI: 7.499
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009554-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS215.13.8e-661723981229
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ecA+a+s+ d +  ++lL+++++ +sp+gd++qR+a++++++L+arla+++s+++  +   + s   s + l++++l++ + P+ ++s+
  AUR62009554-RA 172 LRKLLIECAQAISKFDRRTSNELLKQIRQYSSPHGDSTQRVAHHVANGLEARLAGTGSTISTDICDMKIS---SFDFLNSYRLYVSAIPFKRMSY 263
                     689****************************************************999999888777776...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++Il+ + +++++HiiDf+i  GlQWp+++q+L++Rp+gpp+lRiTg++ p++g   +e++ +tg+rLa +++++gvpf+++  +a+++e+
  AUR62009554-RA 264 IQANNTILKLAVKATKIHIIDFGIFLGLQWPSFIQTLSKRPNGPPELRITGIDFPQQGfrPTERVDATGHRLAGYCRRFGVPFKYQG-IAEKWET 357
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLk 229
                     ++l++L+++++E+++Vn++++  +l+de+v+++s++d++L+
  AUR62009554-RA 358 IQLQDLKIENDEMVIVNCMFRSGTLHDETVEQNSPKDAFLR 398
                     ***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MIALPEILLA LSSRNWGHSP PQLDLTTVND GDDFVQSFLQ LNPQSFGSSS KDGDDEEVND  60
VVVPKKPLST ASKKGEKPVK GSRRKKSRQR DDDVDYEGGR CNKLQASSSE DYAELEQYDD  120
ILLCSENKED ASLSPKECLI VEASGKFLKT KGHGSRGVRG KKQNIEVDEV DLRKLLIECA  180
QAISKFDRRT SNELLKQIRQ YSSPHGDSTQ RVAHHVANGL EARLAGTGST ISTDICDMKI  240
SSFDFLNSYR LYVSAIPFKR MSYIQANNTI LKLAVKATKI HIIDFGIFLG LQWPSFIQTL  300
SKRPNGPPEL RITGIDFPQQ GFRPTERVDA TGHRLAGYCR RFGVPFKYQG IAEKWETIQL  360
QDLKIENDEM VIVNCMFRSG TLHDETVEQN SPKDAFLR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.12e-90GRAS family protein