PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62009593-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 399aa MW: 42406.6 Da PI: 7.1618

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62009593-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	105.9	2.1e-33	94	141	3	50
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50 e+ lkcprCds+ntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvP AUR62009593-RA 94 EAPLKCPRCDSSNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 141 6789*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MVFSSVPHYL DPPNWQQHPN HQQLLQGNNN GSGGNQHDHQ NHQQHLLSPP PMPGQQPGQP 60 QMGMGGGGGG PGAQPMRPNS MAERARQAKI PPPEAPLKCP RCDSSNTKFC YFNNYSLSQP 120 RHFCKACRRY WTRGGALRNV PSSLSSPTGM IGGERLPLHM DLVSTSGLGP SFPGMPSAGG 180 GTGMSSFMAS LQNIAQLGMG NLGLNFGGGL NTPPPHPLGG LGGLSGSEHP PHNHQMDYPH 240 QLNPNPSNNQ QQQVHHHQFP NFLGGFEIPG GSSAGAGLYT SSFQNDHQGI DGGGSDDQHH 300 HDQDDDQVNS NLLKSCSSTM TSQLAPVKME GDGQRLNLAK QFMGISSSDH NNNNINNNNN 360 ATGHQFWGGN NIGNNSATPT SMWTDLSGLN SSSTSHLL*

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MVFSSVPHYL DPPNWQQHPN HQQLLQGNNN GSGGNQHDHQ NHQQHLLSPP PMPGQQPGQP  60
QMGMGGGGGG PGAQPMRPNS MAERARQAKI PPPEAPLKCP RCDSSNTKFC YFNNYSLSQP  120
RHFCKACRRY WTRGGALRNV PSSLSSPTGM IGGERLPLHM DLVSTSGLGP SFPGMPSAGG  180
GTGMSSFMAS LQNIAQLGMG NLGLNFGGGL NTPPPHPLGG LGGLSGSEHP PHNHQMDYPH  240
QLNPNPSNNQ QQQVHHHQFP NFLGGFEIPG GSSAGAGLYT SSFQNDHQGI DGGGSDDQHH  300
HDQDDDQVNS NLLKSCSSTM TSQLAPVKME GDGQRLNLAK QFMGISSSDH NNNNINNNNN  360
ATGHQFWGGN NIGNNSATPT SMWTDLSGLN SSSTSHLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.3	3e-35	Dof family protein