PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009724-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 120aa    MW: 13081.1 Da    PI: 7.8681
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009724-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260137.16.4e-43191181100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C+++pyf  ++p+kfa+vhk+FGasnv+kll ++p+++r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+
  AUR62009724-RA  19 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLMEVPDNQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQTLQAELN 113
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  AUR62009724-RA 114 AVRAE 118
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MMGVGPPPHL GTTLNTITPC AACKLLRRRC AEECPFSPYF SPHEPQKFAA VHKVFGASNV  60
SKLLMEVPDN QRADAANSLV YEANVRLRDP VYGCMGAISA LQQQVQTLQA ELNAVRAEIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30340.17e-69LBD family protein