PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009806-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 233aa    MW: 25537.7 Da    PI: 5.1741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009806-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.4e-1266115255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr  +  g+Wv+e+r+p   +k+ r++lg++ tae  a+a++ a ++l+g
  AUR62009806-RA  66 IFRGVR-ERDGGKWVCEVREP---NKKSRIWLGTYPTAELPARAHDVATLALRG 115
                     59***9.5559******9998...347*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNPQISSQVP YSPPSSSGES DDITSLDSPS FQSAPPLSTS LSGEATCPPH KRKAGRKKFK  60
ETCHPIFRGV RERDGGKWVC EVREPNKKSR IWLGTYPTAE LPARAHDVAT LALRGDKASL  120
NFPDSAWLAP RAKSSSAQDI RLAALQATRS DLGSSSPYEG CKSEDMGEKS SMSFESKELL  180
FIDEEVIYNM PAFIDSMAAG MLLTPPSLKR GVNWDEMEED EANCHIDLNL WQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.18e-52ERF family protein