PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62009868-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 286aa    MW: 31647.9 Da    PI: 8.5781
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62009868-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.15.9e-33135190258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +p+YVNaKQy++Il+RRq+Rakle+++kl +k+rkpylheSRh+hAl+R RgsgGrF
  AUR62009868-RA 135 DPIYVNAKQYHGILRRRQHRAKLEAQNKL-AKNRKPYLHESRHQHALKRTRGSGGRF 190
                     7****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGVPAQRYQG AKLLDFSLQD QDSCSTQSTG QFYTSSASFG ENDLHTQSMS FAQSGYNVTH  60
GKHESSEYKF NFSMGTQDYT LPPLQTDFNQ AIPQFAVSFP DQHYNGVMST YAPQAVMMGI  120
MPARVPLPLD FSASDPIYVN AKQYHGILRR RQHRAKLEAQ NKLAKNRKPY LHESRHQHAL  180
KRTRGSGGRF LNMKKLQESN PTAQTTKDHN KVSGTISLHL AGNPSGSEIR KQENYGEGTS  240
TTSCSDVTST SNSDDIYHPL EFRFSNYSSG YGEAVLGGGS TENYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.19e-50NF-YA family protein