PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010136-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CAMTA

Protein Properties

Length: 1001aa MW: 111607 Da PI: 5.9592

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010136-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	184.1	1.5e-57	21	136	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + ++rwl++ ei++iL n++k+++++e++trp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+e+n+ fqrr AUR62010136-RA 21 EAQHRWLRPAEICEILRNYQKFQISSEPPTRPSSGSLFLFDRKILRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEDNECFQRR 115 349****************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 +ywlLeee+ +iv+vhylevk AUR62010136-RA 116 SYWLLEEEYMHIVFVHYLEVK 136 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence
MADRGSIAPG IRLDIQQLQL EAQHRWLRPA EICEILRNYQ KFQISSEPPT RPSSGSLFLF 60 DRKILRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEDNE CFQRRSYWLL 120 EEEYMHIVFV HYLEVKGNRS SIREAEPLIS SSQISNSVSS SVSNSYNEAF TGNTGSPSAV 180 SSLTSSYEDI ESEDNYQAMS KYPSPVTFQN MEDTVENNKP GSLMNSNFIS TYPDNYKGSQ 240 LPGPGLDYTS LAQRGAGTND YNQLKTLDLG SWEEVFQQST RGPENLLPNP LLSGAPLVGS 300 IDGYNESFSQ LLDAGFGVNG APGASLAPYL QSNNPLELSF TEYQDNTNIT ATAKQPLLGS 360 IRAEEGLQKV DSFNKWMTKE LAEVDDLDLK STSNLSWQNI EAAASVDDPS DYSMSPSIGQ 420 DQLFDIQDFS PSCASTDSET KVVITGKFMV SPSEVFKYNW SCMFGEVEVP AKVLGNGVLC 480 CYAPLHSVGR VPFYVTCSNR FACSQVREFE YLVQGKKDKN TVSSMTENQL WLRLQNLLSI 540 SSPGNFDSTS ESIRKKERIF RKIFLLMEDE LVLGVEQHLK EKVVSWLFDK VSSEDGKGPN 600 TLDEEGQGLL HLAAALGFDW IIPPTLAAGV SVNFRDINGW TALHWAACYG REKTVAFLVA 660 LEAGSGLVTD PSPEFPLGRT AADLASANGY KGISGFLAEH SLTAHLETLT MTERKKDSPV 720 ENSMNNAVQT MREKVATPGD EGDGSDLSLK DSLAAVRNAT QAAGRIHQVF RMQSFQRKQV 780 SKGAGDDESL LTDEQFLSLV SSKIKRPGHP DEKAHSAATH IQKKFRGWKK RKEFLTIRER 840 VVRIQAHVRG HQARKRYKPV VWSVGILEKA ILRWRRKGTG LRGFRSDALN KAASSTDAPP 900 VVQKPPSEED DYDYLKEGRK QTEERLQKAL VRVKSMVQYP DARAQYRRLL TAVEGFQKNQ 960 SQVQDSTLNR TDIAPAEGED DMIDVESLLH DDNFMAIAFE *

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence

MADRGSIAPG IRLDIQQLQL EAQHRWLRPA EICEILRNYQ KFQISSEPPT RPSSGSLFLF  60
DRKILRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEDNE CFQRRSYWLL  120
EEEYMHIVFV HYLEVKGNRS SIREAEPLIS SSQISNSVSS SVSNSYNEAF TGNTGSPSAV  180
SSLTSSYEDI ESEDNYQAMS KYPSPVTFQN MEDTVENNKP GSLMNSNFIS TYPDNYKGSQ  240
LPGPGLDYTS LAQRGAGTND YNQLKTLDLG SWEEVFQQST RGPENLLPNP LLSGAPLVGS  300
IDGYNESFSQ LLDAGFGVNG APGASLAPYL QSNNPLELSF TEYQDNTNIT ATAKQPLLGS  360
IRAEEGLQKV DSFNKWMTKE LAEVDDLDLK STSNLSWQNI EAAASVDDPS DYSMSPSIGQ  420
DQLFDIQDFS PSCASTDSET KVVITGKFMV SPSEVFKYNW SCMFGEVEVP AKVLGNGVLC  480
CYAPLHSVGR VPFYVTCSNR FACSQVREFE YLVQGKKDKN TVSSMTENQL WLRLQNLLSI  540
SSPGNFDSTS ESIRKKERIF RKIFLLMEDE LVLGVEQHLK EKVVSWLFDK VSSEDGKGPN  600
TLDEEGQGLL HLAAALGFDW IIPPTLAAGV SVNFRDINGW TALHWAACYG REKTVAFLVA  660
LEAGSGLVTD PSPEFPLGRT AADLASANGY KGISGFLAEH SLTAHLETLT MTERKKDSPV  720
ENSMNNAVQT MREKVATPGD EGDGSDLSLK DSLAAVRNAT QAAGRIHQVF RMQSFQRKQV  780
SKGAGDDESL LTDEQFLSLV SSKIKRPGHP DEKAHSAATH IQKKFRGWKK RKEFLTIRER  840
VVRIQAHVRG HQARKRYKPV VWSVGILEKA ILRWRRKGTG LRGFRSDALN KAASSTDAPP  900
VVQKPPSEED DYDYLKEGRK QTEERLQKAL VRVKSMVQYP DARAQYRRLL TAVEGFQKNQ  960
SQVQDSTLNR TDIAPAEGED DMIDVESLLH DDNFMAIAFE *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein