PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62010211-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 780aa MW: 88751.8 Da PI: 7.2941

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62010211-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.7	6.2e-31	70	161	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk +++gkw+v+ + +eHnHel+p AUR62010211-RA 70 FYNSYARRIGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRMITRVGCKAMLSVKIQDSGKWVVSGFCKEHNHELVP 161 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence
MENQVLNFDI ELGPGATISD DAIEIDENDI PETPFLHPTT PFSFAIEGEL LDLEPYDGME 60 FESEEAAKAF YNSYARRIGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN LNEKRTKDRE 120 IKRPRMITRV GCKAMLSVKI QDSGKWVVSG FCKEHNHELV PPDQVHCLRS HRQISGPAKT 180 LIDTLQAAGL GPRRIMSALI KEYGGISKVG FTEVDCRNYM RNNKQRSIEG DFQLLIEYLK 240 QMKLENSGFY FAVQGDGDHN SSCSTGNVFW ADSRGRMNYS YFGDTVTFDT TFRSNRYRLP 300 FAPFTGINHH GHPVLFGCAF LINESESSLV WLFNTWLDAM SGKHPLSITT DYDATIKSAI 360 MQVFPGTRHR FCKWHIFKKC QEKLSHVLLE LPGFEADFHK CVNLPESVDE FESCWLSVLD 420 RYDLRDNGWL QLIYSARRQW VPVYLRDAFF AEMSVTQRSD SMNSYFDGYV NASTNLSQFF 480 KLYEKALESR NEKEVKADFE TISTPPALKT PSPMEKQVSG LYTRKVFMRF QEELVGTLTY 540 MATKTDDVGE VITYQVAKYG EDHKVFCVRF NVLEMQATCS CQMFEFSGLL CRHVLAVFRV 600 TNILTLPSHY ILKRWTRNAK SSVMLDNPHG STVTSYLESH IVRYNSLRHE AFKFVDEGAS 660 TSETYDVAVA ALEEAAEKVS QALKSVRKSS MANGPVKDLM RGGSGNKSSH DNGMSRSQLV 720 SEDCMDQKIR ELSEELESAN RKCEVYRANL LSVLKDIEDH KQLLSVKVRN VKLGLKNAI*

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence

MENQVLNFDI ELGPGATISD DAIEIDENDI PETPFLHPTT PFSFAIEGEL LDLEPYDGME  60
FESEEAAKAF YNSYARRIGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN LNEKRTKDRE  120
IKRPRMITRV GCKAMLSVKI QDSGKWVVSG FCKEHNHELV PPDQVHCLRS HRQISGPAKT  180
LIDTLQAAGL GPRRIMSALI KEYGGISKVG FTEVDCRNYM RNNKQRSIEG DFQLLIEYLK  240
QMKLENSGFY FAVQGDGDHN SSCSTGNVFW ADSRGRMNYS YFGDTVTFDT TFRSNRYRLP  300
FAPFTGINHH GHPVLFGCAF LINESESSLV WLFNTWLDAM SGKHPLSITT DYDATIKSAI  360
MQVFPGTRHR FCKWHIFKKC QEKLSHVLLE LPGFEADFHK CVNLPESVDE FESCWLSVLD  420
RYDLRDNGWL QLIYSARRQW VPVYLRDAFF AEMSVTQRSD SMNSYFDGYV NASTNLSQFF  480
KLYEKALESR NEKEVKADFE TISTPPALKT PSPMEKQVSG LYTRKVFMRF QEELVGTLTY  540
MATKTDDVGE VITYQVAKYG EDHKVFCVRF NVLEMQATCS CQMFEFSGLL CRHVLAVFRV  600
TNILTLPSHY ILKRWTRNAK SSVMLDNPHG STVTSYLESH IVRYNSLRHE AFKFVDEGAS  660
TSETYDVAVA ALEEAAEKVS QALKSVRKSS MANGPVKDLM RGGSGNKSSH DNGMSRSQLV  720
SEDCMDQKIR ELSEELESAN RKCEVYRANL LSVLKDIEDH KQLLSVKVRN VKLGLKNAI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein