PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010242-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 256aa    MW: 28517.8 Da    PI: 7.6259
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010242-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-1374117855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR++++s f++L +llP++    + K +K +i+e+Av+Y+k Lq
  AUR62010242-RA  74 TERERRKKMRSMFATLHSLLPQL----NAKADKTTIVEEAVNYVKTLQ 117
                     6*********************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAHEINHEND AFLWETQSWV NLSNDTADNS SGEKVVSVPA AEPTGERKRR RTAAMKGKGK  60
EGEGPSEHEI HIWTERERRK KMRSMFATLH SLLPQLNAKA DKTTIVEEAV NYVKTLQNTV  120
ERLEIQKIER NQGLPPMSTF PIGPPLPATS RLATLPTREA PVKIKTWTAS NVVLSICGNI  180
AQYAVYATKK PVLFTTICSV LEKRDGTTAL FVGILLTLKP DAIRSEREVV IAKAMLLEEL  240
DDILLREYME IGQAD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14751RKRRR
24752RKRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-35bHLH family protein