PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010300-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 221aa    MW: 24938 Da    PI: 6.3025
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010300-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.81.3e-1190186286
            FAR1   2 fYneYAkevGFsvrkskskks..krngeit.krtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                     +Yn+++k+  F v+  +s ++  k+ ++++   t++C + g ++++++          ++++   ++ +++gC+a +   ++++gkwe+t++ele
  AUR62010300-RA  90 YYNAFGKQERFGVVLGQSAYKtlKDGRKVKcVVTWKCECAGWPDTRRRIrgkrvakelAREAVAIKKLKKCGCEAGMYAGLKEHGKWEITRVELE 184
                     8*************99987776755444441579********999988888999988777777899***************************** PP

            FAR1  85 Hn 86 
                     H 
  AUR62010300-RA 185 HK 186
                     *6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MTELIFKVEA VMVSVEVVED ISVSLSEGGV MDLIKFEEVE GAGDIGELCP YEGGEEMDMD  60
GGNLVYLNKV KIDPPKVGMN FETWEEADVY YNAFGKQERF GVVLGQSAYK TLKDGRKVKC  120
VVTWKCECAG WPDTRRRIRG KRVAKELARE AVAIKKLKKC GCEAGMYAGL KEHGKWEITR  180
VELEHKPHVV SPSKSMLVTK YRLDELERMP YMKLYEVVKI *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135158RRRIRGKRVAKELAREAVAIKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.13e-08FAR1 family protein