PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010428-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family SRS
Protein Properties Length: 144aa    MW: 15336.9 Da    PI: 6.4071
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010428-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70275.71.3e-23238096153
          DUF702  96 skkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     ++  le  ++P+ev+s+a frc+rvss d+  +++aYqt+++igGhvfkG+LydqG+ 
  AUR62010428-RA  23 TSAGLEGGNFPAEVNSSATFRCIRVSSEDNVVDQYAYQTSITIGGHVFKGVLYDQGPT 80 
                     345667778***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MDHYNQYLPL PLSLSNIHHH SPTSAGLEGG NFPAEVNSSA TFRCIRVSSE DNVVDQYAYQ  60
TSITIGGHVF KGVLYDQGPT TARRGGEASS IATSDHHPFN ITGTATSMAA GTHPNIYHPA  120
SLYSAPSFNA FLPVCSTNKI ELD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.19e-24SRS family protein