PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010555-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 256aa    MW: 29000.9 Da    PI: 6.523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010555-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-1191141355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       h e+Er+RR ++ s    L++llP      +++K s ++ L +Av+YI+++q
  AUR62010555-RA  91 IIHREIERKRRLEMSSLHTSLKSLLPVeY---TKGKRSISDHLGEAVKYIQQMQ 141
                     569************************77...********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MFDPLCSQNN EIFLDISDFV PLTQFEGGQI TPTLLEQHNN DLDNLLNQIP SFIDDPPLTP  60
NLNRKKRSLA IDRDQENNGI NPYDSKKKQK IIHREIERKR RLEMSSLHTS LKSLLPVEYT  120
KGKRSISDHL GEAVKYIQQM QQKMKVLNEK RDALKEEVSK LEGHKKNVSD VIVNVLKESV  180
EVIVSTYCRD DDENEGQGLP LSKVLQCLVQ EGLDVVSSSS KRVNNIFVHS IQAQEGEDGK  240
IAIDATNLKN KILRS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16490RKKRSLAIDRDQENNGINPYDSKKKQK
286101KKKQKIIHREIERKRR
397102ERKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-21bHLH family protein