PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010658-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 226aa    MW: 25108.7 Da    PI: 4.7761
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010658-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-174595155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++   +rWv+e+r p  n+ + r++lg++ tae+Aa+a++ a+++l+g
  AUR62010658-RA 45 PVYRGVRQRN-GNRWVCEVRPP--NN-KSRIWLGTYPTAEMAARAHDVAALALRG 95
                    68*****999.9******6666..44.7*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDGGNRQWID PNAQRGSHSD DEMVLASSCP KKKAGRKKFK ETRHPVYRGV RQRNGNRWVC  60
EVRPPNNKSR IWLGTYPTAE MAARAHDVAA LALRGRTACL NFADSAWRLR VPASTDTRDI  120
QKAAAEAAQA FAGEGSEINV GESSNINDNV IEAYAGDNEV RNNNCEVLQG NAEYMDDEAL  180
YDMPGLLVNM AEGLLLPPPH NPYEEFSWND TESDDYEVSL WSYSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-64ERF family protein