PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62010948-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 187aa    MW: 20277.9 Da    PI: 7.9077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62010948-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.0001551901155
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  AUR62010948-RA 51 VRKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 90
                    57778889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
METNNWEEQV VLQQQQANHH PHLCNSNASG GAVAKKAKVQ PSTTPSTAFK VRKEKLGDRI  60
TALHQLVSPF GKTDTASVLL EAIGYIRFLQ SQIEALSLPY LNTGAGNKMQ PHPIQGERKC  120
IFPEDPGQLL NDNCLKRKGG PDQDSYEEAK DLRSRGLCLV PVSCTLHVGS DNGADYWAPA  180
LGGGFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-68bHLH family protein