PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011010-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 216aa    MW: 24955.2 Da    PI: 4.9939
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011010-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.93.5e-15589286
        trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                    W++q + aL+e+  e+  +l+r++l+  +W +v++++ +++  +rs   C+++++ l+++yk++k+  ++   + ss++++f++++
  AUR62011010-RA  5 WSEQGTFALLEIWGERFLQLGRSSLRSEDWNDVAERVsEATRSKRSVSDCRSRLNALKMKYKREKAKVISL-GGGSSKWVFFKKMD 89
                    *************************************55566799************************97.78888********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MVSDWSEQGT FALLEIWGER FLQLGRSSLR SEDWNDVAER VSEATRSKRS VSDCRSRLNA  60
LKMKYKREKA KVISLGGGSS KWVFFKKMDV LMTMSPRQLQ QQEQCGLACG VDSGEFVFMN  120
PRVYLDHSNA SDEMRDSPGN SEMLSESIKR VGEIYEKMED SKKQHMEELD RMREEFQREL  180
ELQKKEMLDR TKVEIAKLGQ KDDQEQDSDC SVENV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-75Trihelix family protein