PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011050-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 427aa MW: 46217.2 Da PI: 7.0663

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011050-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.3e-32	251	306	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ AUR62011050-RA 251 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 306 68****************************************************97 PP
2	Myb_DNA-binding	40.5	6.2e-13	253	304	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ AUR62011050-RA 253 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 304 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MMASPSELSL DCKPQSYSML LKSFGAGGDH NNPTDQATNK LEEYLNRLEE ERHKIDAFKR 60 ELPLCMQLLT NAMEASRQQL QSFRVNNQGA RPVLEEFMPL KHSNLEGSDQ KTANISDKAN 120 WMVSAQLWSP AGDANKQQSS TTLPKSEADT GFSVSSPKLA LDTKQRNGGA FLPFAKERNS 180 VPNNSNIRPL PDLALASSDR EVDDKSENGL SGSRSDNSSK GGNAIVGMAS TDSQAPIAXX 240 XXXXXXQTNR KARRCWSPDL HRRFVNALQM LGGSQVATPK QIRELMKVDG LTNDEVKSHL 300 QKYRLHTRRP SPSPQAVGGQ APQLVVLGGI WVPPEYATAA AAAHGGAPTI YSAHPSTQTT 360 SHTQTHSSPE SDAQRAGDRS ESIEDGKSDC SSWKGESGEN GGEGRKLAAL RDDGEESNGS 420 QITLKF*

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MMASPSELSL DCKPQSYSML LKSFGAGGDH NNPTDQATNK LEEYLNRLEE ERHKIDAFKR  60
ELPLCMQLLT NAMEASRQQL QSFRVNNQGA RPVLEEFMPL KHSNLEGSDQ KTANISDKAN  120
WMVSAQLWSP AGDANKQQSS TTLPKSEADT GFSVSSPKLA LDTKQRNGGA FLPFAKERNS  180
VPNNSNIRPL PDLALASSDR EVDDKSENGL SGSRSDNSSK GGNAIVGMAS TDSQAPIAXX  240
XXXXXXQTNR KARRCWSPDL HRRFVNALQM LGGSQVATPK QIRELMKVDG LTNDEVKSHL  300
QKYRLHTRRP SPSPQAVGGQ APQLVVLGGI WVPPEYATAA AAAHGGAPTI YSAHPSTQTT  360
SHTQTHSSPE SDAQRAGDRS ESIEDGKSDC SSWKGESGEN GGEGRKLAAL RDDGEESNGS  420
QITLKF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-114	G2-like family protein