PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011055-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 476aa    MW: 52641.1 Da    PI: 5.6581
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011055-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.11.4e-123934531374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                     lv++Ll+cA+a++ g+++la++l+ ++s+    + ++   + ++a yf  AL++rl + + +++ a p s      +s+    ++ f+e++P+lk
  AUR62011055-RA  93 LVHALLTCADALQRGEFQLANSLIGEMSNGmmtRVNTTCGIGKVAGYFIDALSRRLCQPSLGVSVAGPGS------VSN-EVLYHHFYEACPYLK 180
                     689************************997433333445789****************333333222222......333.356789********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     f+h+taNqaIlea+eg+ +vHiiDf++++GlQWpaL+qaLa Rp+gppslR+T++++++s+ ++  +et+ rLa++A++++v+f+f+v+++ rle
  AUR62011055-RA 181 FAHFTANQAILEAFEGQAHVHIIDFNLMHGLQWPALIQALALRPGGPPSLRLTAISPSTSNVHDFFHETRMRLAQLARSINVRFSFRVVTTLRLE 275
                     *********************************************************9999***************************9999*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d+++++++++p+E++aVn++lq hrll  +++    +++vL+ +ksl+Pk+v+vveq+a+hn ++Fl rf+eal+yysa+fdslea    + e++
  AUR62011055-RA 276 DIKPWMFQTSPEEVIAVNSILQFHRLL--NTN----INQVLESIKSLNPKIVTVVEQDANHNVPEFLVRFTEALHYYSAMFDSLEAC---QLEAA 361
                     **************************9..333....456*********************************************998...45777 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + + + +++rei+n+++ceg++r+erhe l kW++rl +aGFk+++++ +a kqa++ll+ ++++g++v+e +g+l+lgW++rpL+++SaW+
  AUR62011055-RA 362 KPLAETFMQREICNIICCEGSARIERHEPLTKWQARLIQAGFKALHMGRNAFKQANMLLSLCSGEGFSVQECDGCLTLGWHNRPLIAASAWQ 453
                     7777778************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MMSSYELSCV VSHPVSDMDE LIGYDRVTSW VNTFVPEHIL GPGSGLGLSY VDPVPNELMK  60
VFGDTWTDQI DGQQLSGESQ LVCDMEEDVG IRLVHALLTC ADALQRGEFQ LANSLIGEMS  120
NGMMTRVNTT CGIGKVAGYF IDALSRRLCQ PSLGVSVAGP GSVSNEVLYH HFYEACPYLK  180
FAHFTANQAI LEAFEGQAHV HIIDFNLMHG LQWPALIQAL ALRPGGPPSL RLTAISPSTS  240
NVHDFFHETR MRLAQLARSI NVRFSFRVVT TLRLEDIKPW MFQTSPEEVI AVNSILQFHR  300
LLNTNINQVL ESIKSLNPKI VTVVEQDANH NVPEFLVRFT EALHYYSAMF DSLEACQLEA  360
AKPLAETFMQ REICNIICCE GSARIERHEP LTKWQARLIQ AGFKALHMGR NAFKQANMLL  420
SLCSGEGFSV QECDGCLTLG WHNRPLIAAS AWQVRTDKDG ISLTNDGSTS SSSSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-128GRAS family protein