PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011135-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 218aa    MW: 24769.8 Da    PI: 9.2333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011135-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.2e-19553153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr++  +g+Wv+eIr+p        kr++lg+f+tae Aaka+++a+  +
  AUR62011135-RA  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRVWLGTFDTAEAAAKAYDQAAILM 53
                    59*****999.**********8.....335*********************9766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVHSKKFRGV RQRQWGSWVS EIRHPLLKKR VWLGTFDTAE AAAKAYDQAA ILMCGRNAKT  60
NFPLSQNINV LEELNYNNNN KLNYKSSNPN SLKSSSSNTH EKFSQALHAK LCKSNKVPSS  120
SLTCLRLDTE NSHIGVWQKR AGPSPNSKWV KTVTFGDIDH EECNKEQEGQ EERGASPSIR  180
KFGRIIHDHD HVHVLDEEEK VALQMIEELL NRNYCSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.15e-47ERF family protein