PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011308-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 97aa    MW: 11441.8 Da    PI: 10.0975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011308-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.5e-081053344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT    +++ +a +++ ++   +W  +ar +  g++++++k ++
   AUR62011308-RA 10 PWTGKQNKQFERALALYDKDtkdRWQNVARLVE-GKSAEEVKRHY 53
                     8********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MASSRNMNTP WTGKQNKQFE RALALYDKDT KDRWQNVARL VEGKSAEEVK RHYEILLEDL  60
NRIEAGRVPI PNYRQSTGNS MNFNEEQRQL RYLRLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-37MYB_related family protein