PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011403-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 191aa    MW: 23043 Da    PI: 5.007
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011403-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.74.4e-1329113190
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     ffk+ + +++l +++l++p +f+++++ +   +   t + ++g sW+++l  ++ +++ ++t+GW +F ++n +k g f+ F++++++ f
  AUR62011403-RA  29 FFKIIL-PHTLHHKILRIPETFTRDFSPQ--LPLFATQTVRTGLSWKLEL--ERIDNKLYFTQGWADFMEQNAIKYGYFLEFEYQENEHF 113
                     556553.67778889********999644..55556666789********..********************************988877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MLKLKKKIGR TDEGCNNKEK QFEIYPHKFF KIILPHTLHH KILRIPETFT RDFSPQLPLF  60
ATQTVRTGLS WKLELERIDN KLYFTQGWAD FMEQNAIKYG YFLEFEYQEN EHFKDYIFDL  120
SCSEIEYPRE YDQYAKYHRD HDDMVIERVM VEEEEDDDID SDCIILKSNY INPSFTAVVR  180
NYNISSTSSY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.15e-22B3 family protein