PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011442-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 232aa    MW: 26805.4 Da    PI: 8.3754
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011442-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.62.4e-18131220198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f+k +++s+v+   +l++p +f++ h  +     + ++tl de+g +W+ k+  rk++    l++GW++F  +++L +gD +vF+l++ ++f  +
  AUR62011442-RA 131 FIKPMLQSHVTGGFWLSFPIPFCKIHlpD----DDEMVTLVDEDGDEWKAKYLARKNG----LSGGWRGFSIDHELVDGDALVFQLIEPTTF--K 215
                     89*********************777532....3458***************667776....***********************9986666..8 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v ++r
  AUR62011442-RA 216 VYIIR 220
                     88877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MVTATASYED KRKQRLEENK KRMEQLNLHK LAQALKPSPR KTHYSSPAKK VKARSSDFGV  60
SSVRRSSRTA DKPPPNYKEY AMEPISEVRR IYKYKRRDIL NRVYASDKDR VYAIERAEEL  120
EQQLGSEFPA FIKPMLQSHV TGGFWLSFPI PFCKIHLPDD DEMVTLVDED GDEWKAKYLA  180
RKNGLSGGWR GFSIDHELVD GDALVFQLIE PTTFKVYIIR VNSTEEDEEQ E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-86B3 family protein