PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011451-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 201aa    MW: 22429.3 Da    PI: 10.7131
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011451-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.11.6e-2175125155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr ++ +grW AeIrd +   g r r++lg+f+t+eeAa+a++aa+++l+g
  AUR62011451-RA  75 KKYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTPEEAARAYDAAARRLRG 125
                     59********.**********55...2.59************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MVLEGIAAVV GQHVLFGTTP TTKPTTCKDD KKVEVSNPNP NTLKRFENEN DRRNVSEKQS  60
NSKGKRFETS TGVEKKYRGV RKRPWGRWSA EIRDRVGRCR HWLGTFDTPE EAARAYDAAA  120
RRLRGSKAKT NFQVPSVVPT STSTTLSPTS SSSSSSYDFM KNNNATTTMY KKKCQVVTSM  180
SQLVTKNSFM ELDLQLGVHK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-22ERF family protein