PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011472-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 203aa MW: 23077.5 Da PI: 9.0126

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011472-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.7	2.1e-13	45	91	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +ErrRR+++ ++f L l+P + kK +Ka+iL +++eY+k+L+ AUR62011472-RA 45 EHVVAERRRREKMTQGFIALSALIPGL-----KKTDKASILAETIEYLKQLE 91 5889*********************.....9***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MNMFSGEWLS DLLICFGSLS DFETSNPKLS NGSKKKVGST SINNEHVVAE RRRREKMTQG 60 FIALSALIPG LKKTDKASIL AETIEYLKQL EERAKVLEEQ TSKRTMESVC LVKKKQRHTL 120 NDNSATSYSY DHQYSNKTIN FDDNLEIEAK VLNNNILIRV HSLKIQGLIQ KIIEEIGNLN 180 MIPLNYQTMP FGSYDITMTI VAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	54	KKKVGSTSINNEHVVAERRRR
2	50	55	ERRRRE
3	51	56	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-32	bHLH family protein