PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62011505-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 621aa MW: 71950.3 Da PI: 4.6512

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62011505-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	144	227	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + +r+etrtgC a++++++ ++++w++++++leHnH + AUR62011505-RA 144 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTFKEAT-----CRRKETRTGCLAMIRLRLVESNRWRIDEVKLEHNHLF 227 69**************************************98877.....999******************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MDENSPNSED LIDEMEDQED DGDEIFENEG LDHESDGHHG FGIEGDDHEN DGEQFFIDAS 60 IHEESEQGIE LEGEDHCSDG QQFLEVRDHN AENDTFQVLN LHCNGEENNL GNNTVGVDDS 120 SSKEKYYHPP VVGMEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC 180 EGFKTFKEAT CRRKETRTGC LAMIRLRLVE SNRWRIDEVK LEHNHLFDPE RVQNSKSHKK 240 IEVGLKRDLE PTVDVEVRTI KLYRTSAIDA ASSWNLTTMQ TENDRSRAIQ SAISEVFPRA 300 HHRFCLPLVM QSIFHNLGQM EEFEAFQSFL NGTVYNSLKI DEFETSWDNM IQRFGIKEHE 360 WLQIWYDDRE KWVPVYQKDI FLAGLFAVQA GESSPFFAGH IHERTSVKEF FDLYDVIIEK 420 KRLKEALDDL ESGGSNLLLR TRCYYELQLS KFYTKQIFEK FQVEVEMMSC CVTINQVHTS 480 GPVTTYVVKE CENGGIKELS NFEVMYDKAA FEVRCVCGGF YLNGYLCRHA LSVLNLNGVE 540 EIPFSYILQR WRKDCKQLYV PDLVSNAIDI SNPTQWYDHL HKRAMQVVEA GMVSQDHYMV 600 AWQAFLESLN KVRLTEEKNV *

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MDENSPNSED LIDEMEDQED DGDEIFENEG LDHESDGHHG FGIEGDDHEN DGEQFFIDAS  60
IHEESEQGIE LEGEDHCSDG QQFLEVRDHN AENDTFQVLN LHCNGEENNL GNNTVGVDDS  120
SSKEKYYHPP VVGMEFESYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC  180
EGFKTFKEAT CRRKETRTGC LAMIRLRLVE SNRWRIDEVK LEHNHLFDPE RVQNSKSHKK  240
IEVGLKRDLE PTVDVEVRTI KLYRTSAIDA ASSWNLTTMQ TENDRSRAIQ SAISEVFPRA  300
HHRFCLPLVM QSIFHNLGQM EEFEAFQSFL NGTVYNSLKI DEFETSWDNM IQRFGIKEHE  360
WLQIWYDDRE KWVPVYQKDI FLAGLFAVQA GESSPFFAGH IHERTSVKEF FDLYDVIIEK  420
KRLKEALDDL ESGGSNLLLR TRCYYELQLS KFYTKQIFEK FQVEVEMMSC CVTINQVHTS  480
GPVTTYVVKE CENGGIKELS NFEVMYDKAA FEVRCVCGGF YLNGYLCRHA LSVLNLNGVE  540
EIPFSYILQR WRKDCKQLYV PDLVSNAIDI SNPTQWYDHL HKRAMQVVEA GMVSQDHYMV  600
AWQAFLESLN KVRLTEEKNV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-105	FAR1 family protein