PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011530-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 182aa    MW: 20394.3 Da    PI: 10.5893
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011530-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-17856153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g WvAeIr+p        +r++lg+f +aeeAa+ +++a+  +
  AUR62011530-RA  8 KKFRGVRQRH-WGAWVAEIRHP-----LlkRRIWLGTFKSAEEAARTYDEAAVLM 56
                    59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MGLLQSTKKF RGVRQRHWGA WVAEIRHPLL KRRIWLGTFK SAEEAARTYD EAAVLMSGRK  60
AKTNFPVTTK ISGSSNEVTS RPSKEPLSKS YPNSVSSLLN SKLRKSYQKL CPSLTCLRLD  120
TENSNIGVWQ KRSIGGQSNS SWVMTVKFDA KNNVEAQETK GGISEEEKVA LQMIEELLNK  180
Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.18e-64ERF family protein