PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011557-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 164aa    MW: 18177.7 Da    PI: 10.6411
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011557-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.11.7e-092347125
                    --S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaH 25
                    y+ +lC +f+ tG C+yGdrCkF+H
  AUR62011557-RA 23 YRIALCWNFRNTGKCHYGDRCKFSH 47
                    66789******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MAKRPSEALF PANRGSVTGK SKYRIALCWN FRNTGKCHYG DRCKFSHKTC KFNFKRTCPY  60
GEKCKFWHTE PVDVDSRSHG KREGSSSSAP VLASESGNAQ TGPKTLVNAE VQNPLKPTAS  120
KHKLPPRRAS SLKWKRPKKI VGIYADWIDE EPSVPGSASG RQQ*