PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011638-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 415aa    MW: 46988.9 Da    PI: 4.686
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011638-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.81.1e-32121501128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lppG+rF+P  +el+++yLk+k++g +l++ + i+e+d ++v   P+dL +    + ++++k+wyfF++r++ky++gkr+ r++ +gyWkatg d
  AUR62011638-RA  12 LPPGYRFEPYIKELINHYLKPKINGLDLPM-NPIHELDHINVygSPEDLTAkfkpQGNGKNKKWYFFTSRNRKYKNGKRPDRSAGDGYWKATGID 105
                     79****************************.88999976555469****8535444445778********************************* PP

             NAM  90 kevlskkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                     k+v++ +g+l+g ++ Lv++      k+++ k ekt W m e r+
  AUR62011638-RA 106 KPVKDDDGTLIGHQRALVYFklnpnkKNKDDKDEKTPWHMLELRV 150
                     ********************88777667888999******99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MEEKHGKSFD NLPPGYRFEP YIKELINHYL KPKINGLDLP MNPIHELDHI NVYGSPEDLT  60
AKFKPQGNGK NKKWYFFTSR NRKYKNGKRP DRSAGDGYWK ATGIDKPVKD DDGTLIGHQR  120
ALVYFKLNPN KKNKDDKDEK TPWHMLELRV HDDEPKATPK RKRDHQDTIT TSMVLDYVIY  180
RIHYKEVAKK EKKAVQVAEN EEAEIPNMEE ANVNDHEQEI NNEGAPVPLY DPFVNNYLLD  240
DPSVNNYLLD DPSINNYLLD DPSVNNNYYN TNSSSNTFDT HSNYQFLGYD YELVNNNNLI  300
DGSNIQSDSI YGGLQDLVPG LNLPCNSIYG DFQDLGSDSY LQRNSIYGGA QDLMPSSNLP  360
SNSIYGGLPD LMPDSNLQCN SIYGAVQDLL PDSNLPCNSI YGAVQDLVPD SSSV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160193KRKRDHQDTITTSMVLDYVIYRIHYKEVAKKEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-25NAC family protein