PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011751-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 288aa    MW: 33025.6 Da    PI: 5.9166
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011751-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72.1e-164087148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l  a++ +G g+W+t a   g++R++k+c++rw++yl
   AUR62011751-RA 40 KGPWSPEEDSKLSSAIATHGVGRWNTLAVFAGLKRSGKSCRLRWLNYL 87
                     79********************************************97 PP
2Myb_DNA-binding49.21.2e-1593136146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +T +E++++++++  +G++ W++Ia++++ gRt++++k++w++
   AUR62011751-RA  93 RGTFTLDEQLRILELHFSWGNR-WSKIAEHLP-GRTDNEIKNYWRT 136
                      899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEYQKSSSSS NDTYYTNERW ESMIRVRDEE DELLNNGLRK GPWSPEEDSK LSSAIATHGV  60
GRWNTLAVFA GLKRSGKSCR LRWLNYLRPD LRRGTFTLDE QLRILELHFS WGNRWSKIAE  120
HLPGRTDNEI KNYWRTKVQK LARQFQCHVN SPQFRNALRN IWIPRLVEQI QAGATTSSNT  180
TKAQIHGPTY DSGNGLLDGF YCSSSTSSDN CCFFDTPLSW AQNSYIVGPE ELCPKPNVST  240
DSSEAHISPV SGSSVELDQN WDQINDYLRE MTLNDEDNML FWETLHN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-65MYB family protein