PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011870-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 287aa    MW: 32265 Da    PI: 5.8025
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011870-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.76.2e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+llv++++++G  +W++ +++ g+ R++k+c++rw +yl
   AUR62011870-RA 14 KGPWTPEEDQLLVNYIHLHGHSNWRALPKHAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding491.4e-1567107143
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 
                      rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k++
   AUR62011870-RA  67 RGNFTQEEEDTIINLHQMLGNR-WSAIAAKLP-GRTDNEIKNK 107
                      89********************.*********.********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MGRAPCCEKM GLKKGPWTPE EDQLLVNYIH LHGHSNWRAL PKHAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF TQEEEDTIIN LHQMLGNRWS AIAAKLPGRT DNEIKNKRAR RSKSSLKDGI  120
SEGPPRRHVK CMDHALEKDC YNDSSNNSNS NNEGDSVRPT HSIIRDPISP QPCTSEVSTI  180
TSTSASENDN CSKENVVKKE GYIGEFPEFN DDFWMEVLSV EDTAMSTEDL PSVSQCYLSN  240
SSVTEPAAAC LTDSKAVAAH SDDMDFFWYN LLTRPDDHLP EFSEML*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-78MYB family protein