PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62011948-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 252aa    MW: 27241 Da    PI: 9.5239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62011948-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-10102146554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  AUR62011948-RA 102 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 146
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MMLQLSSGPG GFHGPPVFPL GLSLDQAGKP NSGFMKHDEG SSSANKRFRD DPQHHLVDAS  60
ANSAHKNVYH GQPMSNPVPV APHQPAVRPR VRARRGQATD PHSIAERLRR ERIAERIRAL  120
QELVPSVNKT DRAAMLDEIV DYVKFLRLQV KVLSMSRLGG AGAVVPLVTD MPISSEEGGE  180
GGRGQPVWEK WSNDGTERQV AKLMEENVGA AMQFLQSKAL CIMPISLASA IYHTQPPDAG  240
SLVKPESNPP S*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.32e-84bHLH family protein