PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012073-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 220aa    MW: 24060.7 Da    PI: 9.4927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012073-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
   AUR62012073-RA  5 KQKWTAEEEAALKAGVLKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMT  60
TGFGSREKSK VALKRVPMHS SPVKQEENTT SVSDVPQSDE EMPDVKNVAT SSAPVEISPA  120
PKRSIVRLDN LILEAITNLK ESGGSNKTAI GSYIEINPLT QCFAEERQAT PFVAVVIKAL  180
MGILREDSAG LRCLEVRLVE WLKEGNGGTP WLAKRLIFG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.15e-66MYB_related family protein