PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012124-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 226aa    MW: 25518.6 Da    PI: 5.581
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012124-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.21.2e-30113166155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+++e+L G++kA+Pkti+e+m+v+gLt+e+v+SHLQkYRl
  AUR62012124-RA 113 RPRLVWTPQLHKRFVDVIEHL-GIDKAVPKTIMEMMNVEGLTRENVASHLQKYRL 166
                     59*******************.********************************8 PP
2Myb_DNA-binding47.54.2e-15115165148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+++ lG +   +ktI+++m+ +g+t++++ s++qky+
   AUR62012124-RA 115 RLVWTPQLHKRFVDVIEHLGIDkaVPKTIMEMMNvEGLTRENVASHLQKYR 165
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEDHWEMGLP SFEDLTPLSQ SLISPELALA FGITPDNTRA QFDLNRAMHD NCSTFCPSEE  60
NIESLSLRLF SGRNDFECSN RMKRGDCFMT DEVNSGSKDD NGDENGLNRA VKRPRLVWTP  120
QLHKRFVDVI EHLGIDKAVP KTIMEMMNVE GLTRENVASH LQKYRLYLKR MEGHSSDGHS  180
TPRRDSAMFD CDGFGSMSMP PHSATPGYCG LESGAYNMFW NRQRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-54G2-like family protein