PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012213-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WOX

Protein Properties

Length: 195aa MW: 22247 Da PI: 8.3653

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012213-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.1	1e-20	34	95	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ AUR62012213-RA 34 KCGRWNPTAEQVKVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 95 568***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.5e-37	34	97	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ AUR62012213-RA 34 KCGRWNPTAEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 97 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MEEGMSGFCI QTTKTTRAAS YGSGGGGPPS SGTKCGRWNP TAEQVKVLTD LFRSGLRTPS 60 TDQIQKISTQ LSFYGKIESK NVFYWFQNHK ARERQKRRRV SKDHDAPCFQ LDDHLKPIAP 120 AKYFGEINQI VCEPERAIET LQLFPLNSYH EQESDKLRMF SNECCKENYA TFAAYTFGRD 180 HFDHPPLDLR LSFF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	100	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	6e-58	WOX family protein