PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012456-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 186aa    MW: 21025.7 Da    PI: 7.5698
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012456-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-19755254
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  AUR62012456-RA  7 RYRGVRQRH-WGSWVSEIRHP-----IlkTRIWLGTFETAEDAARAYDEAARLMC 55
                    69******9.**********8.....556**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPILKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR  60
TNFPYNPNAP QTSSSKLLSA TLTAKLHRCY MASLQVTKNS AMQAQQRVPS PQFSGSGPKF  120
GETGPWSPEY GSTIGQVLPS PEPNWAMKVE NVQLEPQLQY TQLEEDHIEQ MIEELLDYGS  180
FEITI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.13e-51ERF family protein