PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012461-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 521aa MW: 57205.8 Da PI: 6.835

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012461-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	47.8	3.1e-15	159	191	23	55
G2-like 23 GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 G+ +A+Pk+ilelm+v+ Lt+e+v+SHLQkYRl AUR62012461-RA 159 GTGEAVPKKILELMNVDKLTRENVASHLQKYRL 191 7789****************************8 PP
2	Response_reg	81.1	3.6e-27	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+++l+k +y +v++++++ +al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+++++ + + G AUR62012461-RA 20 VLAVDDDPICLRLLESLLRKCQY-HVTTTSQAIQALKMLRENKnmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGITHG 112 799******************.***********999999***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + AUR62012461-RA 113 ACDYLLKPVRLEELKN 128 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MTVEQREDES IDQFPVGMRV LAVDDDPICL RLLESLLRKC QYHVTTTSQA IQALKMLREN 60 KNMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP 120 VRLEELKNIW QHVVRRKKFD PKDRNSSNSL DKNSGGDNGT GEAVPKKILE LMNVDKLTRE 180 NVASHLQKYR LYLKRISAVA NQQANMAAAL GGPDYLRMNA VNFHGFNASP QFHNNSLRPI 240 PPPGVLGRLN TPAGMGGLHG LPPSGLVQLS QPQNPTSSIT DSKLYPNLFA GDHTGNVLQG 300 MPTSLEFDQL HKNNTILSGS SNSILSLPNS LLTMQGRSSQ ETQSLDSFGV NMNSAPNLLD 360 HNRCSSSWPA AVQSQPNSMN PMDNRVHDFS PNISIQSRLQ NSNMMGENMM QNTSHVAKQV 420 WDVDFLDGSA NPSVTGTHSV YNPSSRSRDT GYDMMGQPGF DCLAPHPQHD QMLQNSAVDM 480 TRKTKQGQFM EQGGRPLGNY NAGNGAGSLE DVVTAMFKPV *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MTVEQREDES IDQFPVGMRV LAVDDDPICL RLLESLLRKC QYHVTTTSQA IQALKMLREN  60
KNMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP  120
VRLEELKNIW QHVVRRKKFD PKDRNSSNSL DKNSGGDNGT GEAVPKKILE LMNVDKLTRE  180
NVASHLQKYR LYLKRISAVA NQQANMAAAL GGPDYLRMNA VNFHGFNASP QFHNNSLRPI  240
PPPGVLGRLN TPAGMGGLHG LPPSGLVQLS QPQNPTSSIT DSKLYPNLFA GDHTGNVLQG  300
MPTSLEFDQL HKNNTILSGS SNSILSLPNS LLTMQGRSSQ ETQSLDSFGV NMNSAPNLLD  360
HNRCSSSWPA AVQSQPNSMN PMDNRVHDFS PNISIQSRLQ NSNMMGENMM QNTSHVAKQV  420
WDVDFLDGSA NPSVTGTHSV YNPSSRSRDT GYDMMGQPGF DCLAPHPQHD QMLQNSAVDM  480
TRKTKQGQFM EQGGRPLGNY NAGNGAGSLE DVVTAMFKPV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-104	ARR-B family protein