PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012489-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 232aa    MW: 25457.3 Da    PI: 7.8352
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012489-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.95e-16131231289
            FAR1   2 fYneYAkevGFsvrkskskks....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 
                     +Y++Y+++ GF+v+ s+  ++    ++++e  ++ ++C ++gk +++++          +  +  +r++++++C a++  + +k+g+we++k + 
  AUR62012489-RA 131 YYKRYGRQEGFRVVGSSGAYKqqggQTTRERRNYSWKCECNGKVDRRRRVngkrilvgeDAIHFASRKSKKCDCPAMMYATVSKEGEWEIKKAVV 225
                     8*************9987777355555666667789*******9999887677887765555666****************************** PP

            FAR1  84 eHnHel 89 
                     eHnH+l
  AUR62012489-RA 226 EHNHSL 231
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
LKQKIDEREE IEDHHLKAGI LQKAVWQGRE GRGANCLTQD PAADQASPVP DGPSADQPTL  60
SSGEPVGYPA PDGPPNASPI SPQFDHAADG ASSRGPMTDD ETDCRNNGFS SVVPPPSVGM  120
VFPTWKDVDV YYKRYGRQEG FRVVGSSGAY KQQGGQTTRE RRNYSWKCEC NGKVDRRRRV  180
NGKRILVGED AIHFASRKSK KCDCPAMMYA TVSKEGEWEI KKAVVEHNHS L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.12e-06FAR1 family protein