PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012492-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 296aa    MW: 33140.4 Da    PI: 6.9126
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012492-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+d+++++G+g+W++ + + g+ R++k+c++rw +yl
   AUR62012492-RA 14 KGPWTSEEDQKLIDYIQKYGPGNWRSLPMKAGLERCGKSCRLRWANYL 61
                     79********************************************97 PP
2Myb_DNA-binding54.92e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   AUR62012492-RA  67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRKPCCDKE GLKKGPWTSE EDQKLIDYIQ KYGPGNWRSL PMKAGLERCG KSCRLRWANY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG  120
IDPVTHGPRL DYFDLPSMLC SQQNSPLMNL PAVLLNLQNL LNPELLRLAT LQNGFPNFNN  180
SQNTILSNML NNSPDNQVPS AQTVNQVDPP MQNIIPSFDE LLGSSSTDNS GFVSNNSYQS  240
FSNGSSFSTA LSPLSSSLLH PIDSSPTYLN GNKSTEDEID SYISNVEKLF ESPVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.14e-91MYB family protein