PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012725-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 191aa MW: 21537.6 Da PI: 9.8196

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012725-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	40.4	6.7e-13	23	50	1	28
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28 kprlrWt +LH+rFv av +LGG++kA+ AUR62012725-RA 23 KPRLRWTDDLHRRFVCAVMKLGGEDKAV 50 79*************************8 PP
2	Myb_DNA-binding	24.6	5.9e-08	25	46	1	22
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r+rWT +++ ++v+av +lGg+ AUR62012725-RA 25 RLRWTDDLHRRFVCAVMKLGGE 46 89******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MMNVDHDNGV NQGVVRPYAR SKKPRLRWTD DLHRRFVCAV MKLGGEDKAV DAAKKDMQLT 60 NQIPEMINSP TSRPVSRRQT RLQHVKDSLI KKALNKHFLG GDDQKMLLQH SILATLPWSE 120 IAVNDGATKV FYVPEEADKR SHGYKVFNDL AESSKAKTKG MNDLDTTLRL NLFDTSAITY 180 EEDISLKLSL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	8e-12	G2-like family protein